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GrainGenes Marker Report: k03300

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Locus	k03300
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 133.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags6a03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/C SNP structure (UNICODE) = ACAAGAGGCASATAAATTGAG Parent 1 SNP sequence = ACAAGAGGCAGATAAATTGAG Parent 2 SNP sequence = ACAAGAGGCACATAAATTGAG
Probe for Locus	bags6a03
Locus	k03300
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = patatin family protein [Arabidopsis thaliana] pir T02131 hypothetical protein F8K4.6 - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - AACCAAAGTGCATTTCCCTG Right 5' - CGAGGTCAACTCGAAGCTGT
Sequence	AV919431
PCR size	401