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GrainGenes Marker Report: k03309

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Locus	k03309
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 80.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags5d21
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = GCTGATGAAARATAGACAGTA Parent 1 SNP sequence = GCTGATGAAAAATAGACAGTA Parent 2 SNP sequence = GCTGATGAAAGATAGACAGTA
Probe for Locus	bags5d21
Locus	k03309
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0703B11.16 [Oryza sativa (japonica cultivar-group)] dbj BAB85297.1 P0703B11.16 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TCACAACAACAACAGCAGCA Right 5' - GCATACAAGCAGATCACCGA
Sequence	AV919262
PCR size	389