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GrainGenes Marker Report: k03335

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Locus	k03335
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 68.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags5n23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/A SNP structure (UNICODE) = CCTTGGGCACMGACGCCGTCA Parent 1 SNP sequence = CCTTGGGCACCGACGCCGTCA Parent 2 SNP sequence = CCTTGGGCACAGACGCCGTCA
Probe for Locus	bags5n23
Locus	k03335
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = metallopeptidase M24 family protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GCGTTCATGGTAGAGCCTTC Right 5' - ACTGGTGCCACTTTGAGCTT
Sequence	AV919398
PCR size	399