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GrainGenes Marker Report: k03364

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Locus	k03364
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 75.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags6k10
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = ATATAGATGTRTATGCATGTA Parent 1 SNP sequence = ATATAGATGTGTATGCATGTA Parent 2 SNP sequence = ATATAGATGTATATGCATGTA
Probe for Locus	bags6k10
Locus	k03364
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = myb protein homolog - rice emb CAA72187.1 myb factor [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TTCTCCCAGTAATTTCCCCC Right 5' - ATACAGCCCCTGGAGGATTT
Sequence	AV919571
PCR size	376