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GrainGenes Marker Report: k03500

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Locus	k03500
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 103.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah11b14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = TTAAAACTAGRTAACTGAAAT Parent 1 SNP sequence = TTAAAACTAGATAACTGAAAT Parent 2 SNP sequence = TTAAAACTAGGTAACTGAAAT
Probe for Locus	bah11b14
Locus	k03500
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = aminotransferase class IV family protein [Arabidopsis thaliana] sp Q8L493 BAL3_ARATH Branched-chain amino acid aminotransferase-like protein
Type	PCR
PCR primers	Left 5' - TCAGTATACGCGTGCTTTCG Right 5' - GCTGCAGTTTTCCGTACACA
Sequence	AV835562
PCR size	430