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GrainGenes Marker Report: k03564

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Locus	k03564
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 131.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah15m02
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = ACTTCTTCACRATGCAGTTCC Parent 1 SNP sequence = ACTTCTTCACAATGCAGTTCC Parent 2 SNP sequence = ACTTCTTCACGATGCAGTTCC
Probe for Locus	bah15m02
Locus	k03564
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = expressed protein [Arabidopsis thaliana] dbj BAB11383.1 unnamed protein product [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - ACCGATCTCGCAATTACAGG Right 5' - TGAAGCACGGGAGGATAAAG
Sequence	AV943094
PCR size	396