GrainGenes Marker Report: k03602
Locus
k03602
Type
CAPS
Chromosome
3H
Map
Hv-HNxH602-3H 292.9
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
bah12e02
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
Restriction enzyme used for CAPS analysis = HaeIII SNP = T/C SNP structure (UNICODE) = GGTTTGCTCCYACTGCTACTT Parent 1 SNP sequence = GGTTTGCTCCTACTGCTACTT Parent 2 SNP sequence = GGTTTGCTCCCACTGCTACTT
Probe for Locus
bah12e02
Locus
k03602
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = P0518C01.5 [Oryza sativa (japonica cultivar-group)] dbj BAB63668.1 P0518C01.5 [Oryza sativa (japonica cultivar-group)]
Type
PCR
PCR primers
Left 5' - CTTTCCAAGGCATCAACCAT
Right 5' - AACGCCTACTACCGGAACCT
Sequence
AV942481
PCR size
353
GrainGenes Marker Report: k03602
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