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GrainGenes Marker Report: k03639

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Locus	k03639
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 248.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah13a17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/G SNP structure (UNICODE) = AATCATCAAGKTCGATCAAGG Parent 1 SNP sequence = AATCATCAAGTTCGATCAAGG Parent 2 SNP sequence = AATCATCAAGGTCGATCAAGG
Probe for Locus	bah13a17
Locus	k03639
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ethylene-responsive protein -related [Arabidopsis thaliana] dbj BAC42685.1 putative bHLH transcription factor bHLH123 [Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - AACCACAGGCACACATTCAA Right 5' - AGGATACAACCCAAGCATCG
Sequence	AV942629
PCR size	351