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GrainGenes Marker Report: k03807

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Locus	k03807
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 43.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah20k17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/C SNP structure (UNICODE) = ACAAATTCAASGTCTCCAGAA Parent 1 SNP sequence = ACAAATTCAAGGTCTCCAGAA Parent 2 SNP sequence = ACAAATTCAACGTCTCCAGAA
Probe for Locus	bah20k17
Locus	k03807
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = B1131G08.1 [Oryza sativa (japonica cultivar-group)] dbj BAB90221.1 B1131G08.1 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GACTTGCAGGGGGTATTTCA Right 5' - TCTTGATCAGGACTCCCAGG
Sequence	AV944211
PCR size	462