Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k03857

[Submit comment/correction]

Locus	k03857
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 232.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah26m24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = ATTTTGAATTRTTTAAAATAT Parent 1 SNP sequence = ATTTTGAATTGTTTAAAATAT Parent 2 SNP sequence = ATTTTGAATTATTTAAAATAT
Probe for Locus	bah26m24
Locus	k03857
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unknow protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ACATCCGCCTGGTAACTACG Right 5' - AATCATGTACTTGCTGGGGC
Sequence	AV945484
PCR size	370