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GrainGenes Marker Report: k04030

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Locus	k04030
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 201.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah34f11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = TCATACGACCYGACACCTAAA Parent 1 SNP sequence = TCATACGACCCGACACCTAAA Parent 2 SNP sequence = TCATACGACCTGACACCTAAA
Probe for Locus	bah34f11
Locus	k04030
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Probable prefoldin subunit 4 (VIP3 protein) emb CAB75507.1 VIP3 protein [Avena fatua]
Type	PCR
PCR primers	Left 5' - GTCCAATCCAATGTAGCGGT Right 5' - CGCTCAGGCTTATCATGCTT
Sequence	AV946630
PCR size	394