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GrainGenes Marker Report: k04240

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Locus	k04240
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 78.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah47a17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/G SNP structure (UNICODE) = TGCCTCACCAKGTGACCAGCC Parent 1 SNP sequence = TGCCTCACCATGTGACCAGCC Parent 2 SNP sequence = TGCCTCACCAGGTGACCAGCC
Probe for Locus	bah47a17
Locus	k04240
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = AT5g39790/MKM21_80 [Arabidopsis thaliana] gb AAL31148.1 AT5g39790/MKM21_80 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - ATTCCACTCAGCCAAACCAG Right 5' - GGTTAAGAACCGTCAGCCAA
Sequence	BJ483733
PCR size	369