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GrainGenes Marker Report: k04438

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Locus	k04438
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 48
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah56c09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = TCAGTGAAGCYCATGAACTTC Parent 1 SNP sequence = TCAGTGAAGCCCATGAACTTC Parent 2 SNP sequence = TCAGTGAAGCTCATGAACTTC
Probe for Locus	bah56c09
Locus	k04438
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unknown protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ATCATTAGCAATGCCGGTTC Right 5' - TTCCGGACAAAGTTTTGGAG
Sequence	BJ459009
PCR size	354