Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k04528

[Submit comment/correction]

Locus	k04528
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 161.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah57m07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = CTCGTGAAGARTGACACAGGC Parent 1 SNP sequence = CTCGTGAAGAATGACACAGGC Parent 2 SNP sequence = CTCGTGAAGAGTGACACAGGC
Probe for Locus	bah57m07
Locus	k04528
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = contains similarity to endo-1,3-1,4-beta-D-glucanase~gene_id:MDB19.5
Type	PCR
PCR primers	Left 5' - CGGACGAGAAGAACACAACA Right 5' - GCTTGGGCCTCCTAGTTTCT
Sequence	BJ485614
PCR size	350