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GrainGenes Marker Report: k04531

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Locus	k04531
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 133.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah58i22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/C SNP structure (UNICODE) = AGGTGTGTATSAAATACCACT Parent 1 SNP sequence = AGGTGTGTATGAAATACCACT Parent 2 SNP sequence = AGGTGTGTATCAAATACCACT
Probe for Locus	bah58i22
Locus	k04531
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative Splicing factor 3B subunit 3 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CAGCGTTCAGATGTCTTGCT Right 5' - GCACTGAGTCCGTTTCCATT
Sequence	BJ485786
PCR size	372