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GrainGenes Marker Report: k04738

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Locus	k04738
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 284.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd13n18
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = AGATAATCAAYAAACAAAGTG Parent 1 SNP sequence = AGATAATCAATAAACAAAGTG Parent 2 SNP sequence = AGATAATCAACAAACAAAGTG
Probe for Locus	basd13n18
Locus	k04738
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative WD repeat protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CTCACTGCCCTCAATCAGTG Right 5' - TAGGCCTTGAGGTCCTTCCT
Sequence	AV928085
PCR size	372