Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k04779

[Submit comment/correction]

Locus	k04779
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 116.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd11h11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/A SNP structure (UNICODE) = TCACAAACACMAAGAGAGTTG Parent 1 SNP sequence = TCACAAACACCAAGAGAGTTG Parent 2 SNP sequence = TCACAAACACAAAGAGAGTTG
Probe for Locus	basd11h11
Locus	k04779
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Ribosomal protein L7Ae-like [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GGGAGCTTTATTTGGTTCTGG Right 5' - TATGAGGGAGAGGACAACCG
Sequence	AV917427
PCR size	469