Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k04784

[Submit comment/correction]

Locus	k04784
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 203.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd13j22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = CCCTGCGGCARTTGTTCCTCA Parent 1 SNP sequence = CCCTGCGGCAGTTGTTCCTCA Parent 2 SNP sequence = CCCTGCGGCAATTGTTCCTCA
Probe for Locus	basd13j22
Locus	k04784
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0085I10.13 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TATTACAAGCAAGGCACCCC Right 5' - TACTGCCATACCCCTTGCTC
Sequence	AV836822
PCR size	361