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GrainGenes Marker Report: k04823

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Locus	k04823
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 122.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd16f13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/C SNP structure (UNICODE) = CCCGGGCGTCSGGGACTATCT Parent 1 SNP sequence = CCCGGGCGTCGGGGACTATCT Parent 2 SNP sequence = CCCGGGCGTCCGGGACTATCT
Probe for Locus	basd16f13
Locus	k04823
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = B1066G12.17 [Oryza sativa (japonica cultivar-group)] dbj BAB89443.1 B1066G12.17 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GGGGGAGGAGCAAAAGATAA Right 5' - ACCATCTCCAGGAGCAACAC
Sequence	AV929726
PCR size	354