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GrainGenes Marker Report: k04903

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Locus	k04903
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 66.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd18k01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = GCCGCCACGGYAAGGAAGACG Parent 1 SNP sequence = GCCGCCACGGTAAGGAAGACG Parent 2 SNP sequence = GCCGCCACGGCAAGGAAGACG
Probe for Locus	basd18k01
Locus	k04903
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = 3-oxo-5-alpha-steroid 4-dehydrogenase (steroid 5-alpha-reductase) family [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - CAGGACAGTTAAGCATGGCA Right 5' - GTGAAAGGCAAACGGACAAT
Sequence	AV931128
PCR size	354