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GrainGenes Marker Report: k04916

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Locus	k04916
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 96.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd18m17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = AAGACTGGGTRTTATCCATAT Parent 1 SNP sequence = AAGACTGGGTATTATCCATAT Parent 2 SNP sequence = AAGACTGGGTGTTATCCATAT
Probe for Locus	basd18m17
Locus	k04916
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = hypothetical protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGGCAAGATGGTCAATTCAA Right 5' - GGTGCAGAAGAGCTACTGGG
Sequence	AV837064
PCR size	351