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GrainGenes Marker Report: k05038

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Locus	k05038
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 301.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd21o07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = ATGCTGCAGCRAAAATAAACA Parent 1 SNP sequence = ATGCTGCAGCGAAAATAAACA Parent 2 SNP sequence = ATGCTGCAGCAAAAATAAACA
Probe for Locus	basd21o07
Locus	k05038
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0043A12.28 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CAAATTGGCATCCTTGTCCT Right 5' - GCAGTAGAGCGAGCGAAGAC
Sequence	AV930297
PCR size	416