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GrainGenes Marker Report: k05097

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Locus	k05097
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 56
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd25d22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/T SNP structure (UNICODE) = CACAGCAGGGKTCCGGCCAAG Parent 1 SNP sequence = CACAGCAGGGGTCCGGCCAAG Parent 2 SNP sequence = CACAGCAGGGTTCCGGCCAAG
Probe for Locus	basd25d22
Locus	k05097
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0560B06.28 [Oryza sativa (japonica cultivar-group)] gb AAK53837.1 Putative glutaredoxin [Oryza sativa]
Type	PCR
PCR primers	Left 5' - ATTGGTTGCAGCGACTTCTT Right 5' - GCGTCACCTTCTTCTTCGTC
Sequence	AV930786
PCR size	358