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GrainGenes Marker Report: k05223

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Locus	k05223
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 196.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd27c06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = GCCGAGGCGCSTGTGCCGTGC Parent 1 SNP sequence = GCCGAGGCGCCTGTGCCGTGC Parent 2 SNP sequence = GCCGAGGCGCGTGTGCCGTGC
Probe for Locus	basd27c06
Locus	k05223
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = zinc-finger protein [Oryza sativa (indica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CAATAGCGTGAGGAGAACCC Right 5' - CCCCAACAATGGAGTAATCG
Sequence	BU990956
PCR size	420