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GrainGenes Marker Report: k05251

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Locus	k05251
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 108.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd27m10
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = TTGCTTCCTCRTAAACCCAGT Parent 1 SNP sequence = TTGCTTCCTCATAAACCCAGT Parent 2 SNP sequence = TTGCTTCCTCGTAAACCCAGT
Probe for Locus	basd27m10
Locus	k05251
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Mg-chelatase subunit XANTHA-F [Hordeum vulgare]
Type	PCR
PCR primers	Left 5' - CAAGTGTTTTCTGTGGGCAA Right 5' - ACACAGGTCTCGCCAAGAGT
Sequence	BJ546236
PCR size	354