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GrainGenes Marker Report: k05276

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Locus	k05276
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 201.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd27o20
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CCTGTATGAAYTTCGAAATGA Parent 1 SNP sequence = CCTGTATGAACTTCGAAATGA Parent 2 SNP sequence = CCTGTATGAATTTCGAAATGA
Probe for Locus	basd27o20
Locus	k05276
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Hypothetical protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GGACCTAACTGAAAGCAGCG Right 5' - CTACAACATCCCCAAGGGTG
Sequence	AV836852
PCR size	350