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GrainGenes Marker Report: k05329

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Locus	k05329
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 0
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd2p19
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/- SNP structure (UNICODE) = ATAGCAGCAGG/-ATCACTTCAC Parent 1 SNP sequence = ATAGCAGCAGGATCACTTCAC Parent 2 SNP sequence = ATAGCAGCAG-ATCACTTCAC
Probe for Locus	basd2p19
Locus	k05329
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ESTs AU082304(C61278),C93463(C50982) correspond to a region of the predicted gene.~Similar to Arabidopsis thaliana DNA
Type	PCR
PCR primers	Left 5' - GACACTGCTGGTTCCTGGAT Right 5' - GGTTGTGTTAAGGCCGACTG
Sequence	AV836787
PCR size	379