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GrainGenes Marker Report: k06058

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Locus	k06058
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 109.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK2O24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CCTTCCACTGYGAAGAAGTCA Parent 1 SNP sequence = CCTTCCACTGCGAAGAAGTCA Parent 2 SNP sequence = CCTTCCACTGTGAAGAAGTCA
Probe for Locus	BaAK2O24
Locus	k06058
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OJ1081_B12.27 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TCTTTCCTGGGTTGGTGAAC Right 5' - GCAGCTTTTGAGTTCGTTCC
Sequence	AV912149
PCR size	187