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GrainGenes Marker Report: k06106

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Locus	k06106
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 80.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK34D14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/C SNP structure (UNICODE) = GATTCGTTCTSCTCAACTCGT Parent 1 SNP sequence = GATTCGTTCTGCTCAACTCGT Parent 2 SNP sequence = GATTCGTTCTCCTCAACTCGT
Probe for Locus	BaAK34D14
Locus	k06106
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ubiquitin-conjugating enzyme E2 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CATCACGAGAAAGACAGGCA Right 5' - TGGCTCCTGAGACAGAAGAGA
Sequence	BJ458993
PCR size	351