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GrainGenes Marker Report: k06114

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Locus	k06114
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 81.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK16B19
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/C SNP structure (UNICODE) = ATCCGCGCTASCTTTTAGCTA Parent 1 SNP sequence = ATCCGCGCTAGCTTTTAGCTA Parent 2 SNP sequence = ATCCGCGCTACCTTTTAGCTA
Probe for Locus	BaAK16B19
Locus	k06114
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative nuclease [Oryza sativa (japonica cultivar-group)] dbj BAB64802.1 putative nuclease [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GTGCTATCTTTGGTGTCGCA Right 5' - TAGTACTCCTCCTCCGTGGC
Sequence	BJ455285
PCR size	348