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GrainGenes Marker Report: k06161

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Locus	k06161
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 266.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK41I21
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/C SNP structure (UNICODE) = CGAGCCGACASTGCACACCGC Parent 1 SNP sequence = CGAGCCGACAGTGCACACCGC Parent 2 SNP sequence = CGAGCCGACACTGCACACCGC
Probe for Locus	BaAK41I21
Locus	k06161
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = B1131B07.13 [Oryza sativa (japonica cultivar-group)] dbj BAB93351.1 B1131B07.13 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGGAGAAGTCATGCATCAGG Right 5' - TGCCAAGTTGAATGATGAGC
Sequence	BJ460618
PCR size	340