Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k06180

[Submit comment/correction]

Locus	k06180
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 46.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK23F04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = CTCCATCGCTYGCTTCGAGCC Parent 1 SNP sequence = CTCCATCGCTTGCTTCGAGCC Parent 2 SNP sequence = CTCCATCGCTCGCTTCGAGCC
Probe for Locus	BaAK23F04
Locus	k06180
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = rhodanese-like domain-containing protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GCGACCACACCCGATATTTA Right 5' - AAGGACGAGGCACGAAGTTA
Sequence	BJ449294
PCR size	353