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GrainGenes Marker Report: k06223

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Locus	k06223
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 48
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK39I11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = GCTTGCTGCCRTCGGTCGTGA Parent 1 SNP sequence = GCTTGCTGCCGTCGGTCGTGA Parent 2 SNP sequence = GCTTGCTGCCATCGGTCGTGA
Probe for Locus	BaAK39I11
Locus	k06223
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0091C07.4 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CCTGCAGCTCTTCATGGTTT Right 5' - ATTTTGCCACTACGGCTGTC
Sequence	BJ460115
PCR size	254