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GrainGenes Marker Report: k06342

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Locus	k06342
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 263.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK22H04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = TCCCGGTGCCRTAGGGAGCTT Parent 1 SNP sequence = TCCCGGTGCCGTAGGGAGCTT Parent 2 SNP sequence = TCCCGGTGCCATAGGGAGCTT
Probe for Locus	BaAK22H04
Locus	k06342
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0060D06.16 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CTTCCGTATGGCAACGATTT Right 5' - GTGATGGTGATGGTGGAGTG
Sequence	BJ449101
PCR size	366