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GrainGenes Marker Report: k06428

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Locus	k06428
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 87.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK35M24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = GCCCGTAAACRTCTTGCTGGC Parent 1 SNP sequence = GCCCGTAAACATCTTGCTGGC Parent 2 SNP sequence = GCCCGTAAACGTCTTGCTGGC
Probe for Locus	BaAK35M24
Locus	k06428
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0489A01.18 [Oryza sativa (japonica cultivar-group)] dbj BAA99527.1 P0489A01.18 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TATTTGGTCTGACGAAGCCC Right 5' - TGCACTGTTATTAGCGTGGC
Sequence	BJ545447
PCR size	439