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GrainGenes Marker Report: k06437

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Locus	k06437
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 146.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK28P18
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = ATAGGCTTTTSTCCTGCCCAA Parent 1 SNP sequence = ATAGGCTTTTCTCCTGCCCAA Parent 2 SNP sequence = ATAGGCTTTTGTCCTGCCCAA
Probe for Locus	BaAK28P18
Locus	k06437
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Similar to Arabidopsis thaliana wak4 gene; wall-associated kinase 4. (AJ009695) [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CGATTTATATAGCGGGTCGG Right 5' - ATCCCTCTGATGCAGACACC
Sequence	BJ457712
PCR size	429