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GrainGenes Marker Report: k06496

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Locus	k06496
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 134.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK36P01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = CCTGCTGTTCYTCTTGGCATG Parent 1 SNP sequence = CCTGCTGTTCTTCTTGGCATG Parent 2 SNP sequence = CCTGCTGTTCCTCTTGGCATG
Probe for Locus	BaAK36P01
Locus	k06496
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = monosaccharide transporter 4 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGCTTGTTTCAGGCTAGCAA Right 5' - ATGTGAAGAGGACCGAGGTG
Sequence	BJ459413
PCR size	355