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GrainGenes Marker Report: k06975

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Locus	k06975
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 125.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL29P13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = AGTTTTTTAGRTTTCACTTAG Parent 1 SNP sequence = AGTTTTTTAGGTTTCACTTAG Parent 2 SNP sequence = AGTTTTTTAGATTTCACTTAG
Probe for Locus	BaAL29P13
Locus	k06975
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative interferon-related protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AGGACCATGTCATTTCTGGC Right 5' - GCGTCTTCACCTTCGTGTG
PCR size	382