Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k06977

[Submit comment/correction]

Locus	k06977
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 255.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL16H03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = GATCCTCTTCYGAGTTCTGCC Parent 1 SNP sequence = GATCCTCTTCCGAGTTCTGCC Parent 2 SNP sequence = GATCCTCTTCTGAGTTCTGCC
Probe for Locus	BaAL16H03
Locus	k06977
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = expressed protein [Arabidopsis thaliana] pir T47622 hypothetical protein T14E10.200 - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - TCCAAAATGACAAGGCAACA Right 5' - AACTTGGCCGTTATCTGCAC
Sequence	BJ473705
PCR size	385