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GrainGenes Marker Report: k07111

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Locus	k07111
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 203.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL4J21
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = GGCAATGCTGYTCTTTGTAGT Parent 1 SNP sequence = GGCAATGCTGTTCTTTGTAGT Parent 2 SNP sequence = GGCAATGCTGCTCTTTGTAGT
Probe for Locus	BaAL4J21
Locus	k07111
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unknown protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AGACCGTTACTCATGGACCG Right 5' - GTGGGCTCGTCAAACTGAAT
Sequence	AV918188
PCR size	259