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GrainGenes Marker Report: k07124

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Locus	k07124
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 0
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL15P01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/C SNP structure (UNICODE) = TGCAAGGCGCMTGCCAAAAAG Parent 1 SNP sequence = TGCAAGGCGCATGCCAAAAAG Parent 2 SNP sequence = TGCAAGGCGCCTGCCAAAAAG
Probe for Locus	BaAL15P01
Locus	k07124
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = NS5 protein - sorghum (fragment)
Type	PCR
PCR primers	Left 5' - CACGCCTAGCAAATGTGAGA Right 5' - CGCAAGATGCTCGAAATACA
Sequence	BJ473652
PCR size	263