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GrainGenes Marker Report: k07157

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Locus	k07157
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 204
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL36N04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/A SNP structure (UNICODE) = GCCAGAGAAAWTTTTCCTCGA Parent 1 SNP sequence = GCCAGAGAAATTTTTCCTCGA Parent 2 SNP sequence = GCCAGAGAAAATTTTCCTCGA
Probe for Locus	BaAL36N04
Locus	k07157
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = cold acclimation protein WCOR615 - wheat gb AAB18208.1 cold acclimation protein WCOR615 [Triticum aestivum]
Type	PCR
PCR primers	Left 5' - GCAACAGCAGAGAAGGAACA Right 5' - TAAGTGTGCTCGTGTCCAGC
Sequence	BJ476744
PCR size	333