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GrainGenes Marker Report: k07161

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Locus	k07161
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 163.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL12N06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = TCAGCAGTTTYCATCCCTCAC Parent 1 SNP sequence = TCAGCAGTTTCCATCCCTCAC Parent 2 SNP sequence = TCAGCAGTTTTCATCCCTCAC
Probe for Locus	BaAL12N06
Locus	k07161
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0684C02.5 [Oryza sativa (japonica cultivar-group)] dbj BAB89049.1 P0684C02.5 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AAGCCATATGAGGAGCATGG Right 5' - AAGCAACACAGGAGGTGGTC
Sequence	BJ473489
PCR size	354