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GrainGenes Marker Report: k07193

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Locus	k07193
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 138
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL4D09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = ATTGTACCAARTTGGGTAAGT Parent 1 SNP sequence = ATTGTACCAAATTGGGTAAGT Parent 2 SNP sequence = ATTGTACCAAGTTGGGTAAGT
Probe for Locus	BaAL4D09
Locus	k07193
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = heat-shock protein, 82K, precursor - rye emb CAA82945.1 heat-shock protein [Secale cereale]
Type	PCR
PCR primers	Left 5' - TCTACTGCTGCATCACCTGG Right 5' - AGCCGACACAAGAGAGGATG
Sequence	AV935444
PCR size	342