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GrainGenes Marker Report: k07455

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Locus	k07455
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 133.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baet29H0715
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CCTCCTTGGCYGCCGCGGA/-TA Parent 1 SNP sequence = CCTCCTTGGCCGCCGCGGATA Parent 2 SNP sequence = CCTCCTTGGCTGCCGCGG-TA
Probe for Locus	baet29H0715
Locus	k07455
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative serine carboxypeptidase I [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TTTGCTCTATGCCGTGACTG Right 5' - ATCACCATCCAAAGGTTCCA
Sequence	AL499954
PCR size	195