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GrainGenes Marker Report: k07498

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Locus	k07498
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 215
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baet30B1004
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = TGGACGACTARGAATTATTGG Parent 1 SNP sequence = TGGACGACTAGGAATTATTGG Parent 2 SNP sequence = TGGACGACTAAGAATTATTGG
Probe for Locus	baet30B1004
Locus	k07498
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBb0065L13.14 [Oryza sativa (japonica cultivar-group)] emb CAE03378.1 OSJNBa0004N05.2 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TCTGACTGCACCCAACAAAC Right 5' - TACGGCCCAGGAATGTAGTC
Sequence	BQ660738
PCR size	253