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GrainGenes Marker Report: k07553

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Locus	k07553
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 358
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS39E07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = ATGCACGCAGYGAAGAAGAGC Parent 1 SNP sequence = ATGCACGCAGCGAAGAAGAGC Parent 2 SNP sequence = ATGCACGCAGTGAAGAAGAGC
Probe for Locus	BaGS39E07
Locus	k07553
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ribophorin I family protein [Arabidopsis thaliana] pir C84428 probable ribophorin I [imported] - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - ACACGAACAAAAGGACTGCC Right 5' - GACAAGGCCAGGAGAAACAA
Sequence	BJ468542
PCR size	393