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GrainGenes Marker Report: k07676

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Locus	k07676
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 116.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS13K12
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = TCGAGACGGCRGTCCACCAGC Parent 1 SNP sequence = TCGAGACGGCAGTCCACCAGC Parent 2 SNP sequence = TCGAGACGGCGGTCCACCAGC
Probe for Locus	BaGS13K12
Locus	k07676
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative glutathione S-transferase [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CAACGGCTTTGAAGACCACT Right 5' - GATACACCCTACCCATCGGA
Sequence	AV915271
PCR size	364