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GrainGenes Marker Report: k07807

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Locus	k07807
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 275
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS39P08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/C SNP structure (UNICODE) = GAATCAGATGMACAAGACAGT Parent 1 SNP sequence = GAATCAGATGAACAAGACAGT Parent 2 SNP sequence = GAATCAGATGCACAAGACAGT
Probe for Locus	BaGS39P08
Locus	k07807
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative threonine synthase [Oryza sativa (japonica cultivar-group)] dbj BAC10696.1 putative threonine synthase [Oryza sativa (japonica cul
Type	PCR
PCR primers	Left 5' - GAACATGGACATGAGCGAAA Right 5' - CTTCTCAGTGAGCAATGGCA
Sequence	BJ468717
PCR size	351