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GrainGenes Marker Report: k07909

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Locus	k07909
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 116.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS17H13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/G SNP structure (UNICODE) = ACACTTGACCKTGGCTGCTGC Parent 1 SNP sequence = ACACTTGACCTTGGCTGCTGC Parent 2 SNP sequence = ACACTTGACCGTGGCTGCTGC
Probe for Locus	BaGS17H13
Locus	k07909
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative protein phosphatase 2C [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AAGAACCGAACCAACACAGG Right 5' - TGCAAGTACCGTTCAACAGC
Sequence	AV918019
PCR size	377